article Open AccessTop 1% cited
Rapid and precise alignment of raw reads against redundant databases with KMA
BMC Bioinformatics · 2018 · Vol. 19(1) · pp. 307–307
Philip T. L. C. Clausen✉(Technical University of Denmark)Frank M. Aarestrup(Technical University of Denmark)Ole Lund(Technical University of Denmark)
Abstract
With KMA, it was possible map raw reads directly against redundant databases with high accuracy, speed and memory efficiency.
Genomics and Phylogenetic StudiesMycobacterium research and diagnosisBacteriophages and microbial interactionsDatabaseComputer scienceMultilocus sequence typingGenomeSortingData miningDNA sequencingRaw dataComputational biologyBiology
MeSH terms
AlgorithmsComputer SimulationHumansSoftwareGenome, HumanDatabases, FactualSequence AlignmentSequence Analysis, DNAComputational BiologyHigh-Throughput Nucleotide Sequencing
Funding
- European Commission
- Center for Genomic Epidemiology
Citations
894
FWCI
15.96
field-weighted impact
References
16
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100%
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