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HTSeq—a Python framework to work with high-throughput sequencing data

Bioinformatics · 2014 · Vol. 31(2) · pp. 166–169
Simon AndersPaul Theodor PylWolfgang Huber

Abstract

HTSeq is released as an open-source software under the GNU General Public Licence and available from http://www-huber.embl.de/HTSeq or from the Python Package Index at https://pypi.python.org/pypi/HTSeq.

Genomics and Phylogenetic StudiesRNA and protein synthesis mechanismsRNA modifications and cancerPython (programming language)Computer scienceScripting languageWorkflowProgramming languageSoftwareParsingOperating systemData miningDatabase

MeSH terms

Gene Expression RegulationHumansSoftwareGenome, HumanGenomicsHigh-Throughput Nucleotide Sequencing

Funding

  • European Commission
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HTSeq—a Python framework to work with high-throughput sequencing data · Scinovex