article Open AccessTop 1% cited
Accurate normalization of real-time quantitative RT-PCR data by geometric averaging of multiple internal control genes
Genome biology · 2002 · Vol. 3(7) · pp. RESEARCH0034–RESEARCH0034
Jo Vandesompele✉(Ghent University Hospital)Katleen De Preter(Ghent University Hospital)Filip Pattyn(Ghent University Hospital)Bruce Poppe(Ghent University Hospital)Nadine Van Roy(Ghent University Hospital)Anne De Paepe(Ghent University Hospital)Frank Speleman(Ghent University Hospital)
Abstract
The normalization strategy presented here is a prerequisite for accurate RT-PCR expression profiling, which, among other things, opens up the possibility of studying the biological relevance of small expression differences.
Molecular Biology Techniques and ApplicationsRNA Research and SplicingGene expression and cancer classificationHousekeeping geneNormalization (sociology)BiologyDatabase normalizationComputational biologyGeneGene expression profilingGene expressionMicroarray analysis techniquesGenetics
MeSH terms
AlgorithmsFemaleHumansReference StandardsRNATime FactorsTumor Cells, CulturedReproducibility of ResultsDNA, ComplementaryReverse Transcriptase Polymerase Chain ReactionGene Expression Profiling
Funding
- Fonds Wetenschappelijk Onderzoek
Citations
19,887
FWCI
45.20
field-weighted impact
References
25
Percentile
100%
vs. same field & year
Citations per year
Cited by
Adipocyte Death, Adipose Tissue Remodeling, and Obesity Complications
Diabetes · 2007 · 973 citations
Greengenes, a Chimera-Checked 16S rRNA Gene Database and Workbench Compatible with ARB
Applied and Environmental Microbiology · 2006 · 11,173 citations
The MIQE Guidelines: Minimum Information for Publication of Quantitative Real-Time PCR Experiments
Clinical Chemistry · 2009 · 15,780 citations
Normalization of Real-Time Quantitative Reverse Transcription-PCR Data: A Model-Based Variance Estimation Approach to Identify Genes Suited for Normalization, Applied to Bladder and Colon Cancer Data Sets
Cancer Research · 2004 · 7,130 citations
A Novel Gene, <i>erm</i> (41), Confers Inducible Macrolide Resistance to Clinical Isolates of <i>Mycobacterium abscessus</i> but Is Absent from <i>Mycobacterium chelonae</i>
Antimicrobial Agents and Chemotherapy · 2009 · 637 citations
Genome-Wide Identification and Testing of Superior Reference Genes for Transcript Normalization in Arabidopsis
PLANT PHYSIOLOGY · 2005 · 3,251 citations
Chromatin signatures of pluripotent cell lines
Nature Cell Biology · 2006 · 1,338 citations
A standard curve based method for relative real time PCR data processing
BMC Bioinformatics · 2005 · 966 citations
References
Quantitative Monitoring of Gene Expression Patterns with a Complementary DNA Microarray
Science · 1995 · 9,572 citations
Systematic variation in gene expression patterns in human cancer cell lines
Nature Genetics · 2000 · 2,090 citations
Kinetic PCR Analysis: Real-time Monitoring of DNA Amplification Reactions
Nature Biotechnology · 1993 · 2,161 citations
The economics of ribosome biosynthesis in yeast
Trends in Biochemical Sciences · 1999 · 1,959 citations
Real time quantitative PCR.
Genome Research · 1996 · 6,197 citations
Citation Network
How this paper connects to the literature. Drag to explore, click any node to open that paper.
