article Open AccessTop 1% cited
Computational protein–ligand docking and virtual drug screening with the AutoDock suite
Nature Protocols · 2016 · Vol. 11(5) · pp. 905–919
Stefano Forli✉(Scripps Research Institute)Ruth Huey(Scripps Research Institute)Michael E. Pique(Scripps Research Institute)Michel F. Sanner(Scripps Research Institute)David S. Goodsell(Scripps Research Institute)Arthur J. Olson(Scripps Research Institute)
Computational Drug Discovery MethodsProtein Structure and DynamicsMonoclonal and Polyclonal Antibodies ResearchAutoDockDocking (animal)Virtual screeningProtein–ligand dockingDrug discoveryComputer scienceSearching the conformational space for dockingDrug designSmall moleculeLigand (biochemistry)
MeSH terms
Drug Evaluation, PreclinicalLigandsProteinsSoftwareStructure-Activity RelationshipUser-Computer InterfaceDrug DesignCatalytic DomainMolecular Docking Simulation
Citations
2,604
FWCI
91.56
field-weighted impact
References
28
Percentile
100%
vs. same field & year
Citations per year
Cited by
A Review on Applications of Computational Methods in Drug Screening and Design
Molecules · 2020 · 667 citations
References
Automated docking of substrates to proteins by simulated annealing
Proteins Structure Function and Bioinformatics · 1990 · 1,271 citations
AutoDock4 and AutoDockTools4: Automated docking with selective receptor flexibility
Journal of Computational Chemistry · 2009 · 24,168 citations
AutoDock Vina: Improving the speed and accuracy of docking with a new scoring function, efficient optimization, and multithreading
Journal of Computational Chemistry · 2009 · 35,688 citations
Automated docking using a Lamarckian genetic algorithm and an empirical binding free energy function
Journal of Computational Chemistry · 1998 · 10,757 citations
A semiempirical free energy force field with charge‐based desolvation
Journal of Computational Chemistry · 2007 · 2,203 citations
Related articles
Computational protein–ligand docking and virtual drug screening with the AutoDock suite
Nature Protocols · 2016 · 2,604 citations
Citation Network
How this paper connects to the literature. Drag to explore, click any node to open that paper.