article Open AccessTop 1% cited
Minfi: a flexible and comprehensive Bioconductor package for the analysis of Infinium DNA methylation microarrays
Bioinformatics · 2014 · Vol. 30(10) · pp. 1363–1369
Martin J. Aryee✉(Johns Hopkins University)Andrew E. Jaffe(Harvard University)Héctor Corrada Bravo(Johns Hopkins University)Christine Ladd‐Acosta(Harvard University)Andrew P. Feinberg(Harvard University)Kasper D. Hansen(Johns Hopkins University)Rafael A. Irizarry(University of Maryland, Baltimore)
Abstract
Supplementary data are available at Bioinformatics online.
Epigenetics and DNA MethylationGenomics and Chromatin DynamicsRNA modifications and cancerBioconductordNaMComputer scienceSuitePreprocessorSoftwareSoftware suiteDNA microarrayThroughputDNA methylation
MeSH terms
AgedAlgorithmsColonic NeoplasmsHumansSoftwareGenomeDNA MethylationOligonucleotide Array Sequence AnalysisPolymorphism, Single NucleotideHigh-Throughput Nucleotide Sequencing
Funding
- National Institutes of Health
Citations
4,743
FWCI
79.58
field-weighted impact
References
39
Percentile
100%
vs. same field & year
Citations per year
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References
High density DNA methylation array with single CpG site resolution
Genomics · 2011 · 1,761 citations
The history of cancer epigenetics
Nature reviews. Cancer · 2004 · 2,348 citations
CpG Islands in vertebrate genomes
Journal of Molecular Biology · 1987 · 3,412 citations
Tackling the widespread and critical impact of batch effects in high-throughput data
Nature Reviews Genetics · 2010 · 2,215 citations
A data-driven approach to preprocessing Illumina 450K methylation array data
BMC Genomics · 2013 · 1,246 citations
A comparison of normalization methods for high densityoligonucleotide array data based on variance and bias
Bioinformatics · 2003 · 8,399 citations
Genome-wide Methylation Profiles Reveal Quantitative Views of Human Aging Rates
Molecular Cell · 2012 · 4,325 citations
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