article Open AccessTop 1% cited

Molecular signatures database (MSigDB) 3.0

Bioinformatics · 2011 · Vol. 27(12) · pp. 1739–1740

Arthur Liberzon✉(Broad Institute)Aravind Subramanian(Broad Institute)Reid M. Pinchback(Broad Institute)Helga Thorvaldsdóttir(Broad Institute)Pablo Tamayo(Broad Institute)Jill P. Mesirov(Broad Institute)

View via DOI Publisher page

Abstract

MSigDB is freely available for non-commercial use at http://www.broadinstitute.org/msigdb.

Bioinformatics and Genomic Networks Microbial Metabolic Engineering and Bioproduction Machine Learning in BioinformaticsComputer scienceDatabaseInterpretation (philosophy)Information retrievalProgramming language

MeSH terms

InternetGenomicsDatabases, GeneticMolecular Sequence Annotation

Citations

7,557

FWCI

28.75

field-weighted impact

References

Percentile

100%

vs. same field & year

Citations per year

Cited by

g:Profiler: a web server for functional enrichment analysis and conversions of gene lists (2019 update)

Nucleic Acids Research · 2019 · 5,344 citations

Comprehensive Genomic Analysis Identifies Novel Subtypes and Targets of Triple-Negative Breast Cancer

Clinical Cancer Research · 2014 · 1,356 citations

Pathway enrichment analysis and visualization of omics data using g:Profiler, GSEA, Cytoscape and EnrichmentMap

Nature Protocols · 2019 · 2,080 citations

Functional mapping and annotation of genetic associations with FUMA

Nature Communications · 2017 · 4,347 citations

The prognostic landscape of genes and infiltrating immune cells across human cancers

Nature Medicine · 2015 · 3,213 citations

The landscape of long noncoding RNAs in the human transcriptome

Nature Genetics · 2015 · 2,873 citations

iRegulon: From a Gene List to a Gene Regulatory Network Using Large Motif and Track Collections

PLoS Computational Biology · 2014 · 978 citations

Optimized sgRNA design to maximize activity and minimize off-target effects of CRISPR-Cas9

Nature Biotechnology · 2016 · 4,855 citations

References

Gene Ontology: tool for the unification of biology

Nature Genetics · 2000 · 43,975 citations

PGC-1α-responsive genes involved in oxidative phosphorylation are coordinately downregulated in human diabetes

Nature Genetics · 2003 · 10,482 citations

Gene set enrichment analysis: A knowledge-based approach for interpreting genome-wide expression profiles

Proceedings of the National Academy of Sciences · 2005 · 55,472 citations

Bioinformatics enrichment tools: paths toward the comprehensive functional analysis of large gene lists

Nucleic Acids Research · 2008 · 14,685 citations

KEGG: Kyoto Encyclopedia of Genes and Genomes

Nucleic Acids Research · 1999 · 32,330 citations

KEGG: Kyoto Encyclopedia of Genes and Genomes

Nucleic Acids Research · 2000 · 38,352 citations

Citation Network

How this paper connects to the literature. Drag to explore, click any node to open that paper.