article Open AccessTop 1% cited

Pathway enrichment analysis and visualization of omics data using g:Profiler, GSEA, Cytoscape and EnrichmentMap

Nature Protocols · 2019 · Vol. 14(2) · pp. 482–517

Jüri Reimand(Ontario Institute for Cancer Research)Ruth Isserlin(University of Toronto)Véronique Voisin(University of Toronto)Mike Kucera(University of Toronto)Christian Tannus-Lopes(University of Toronto)Asha Rostamianfar(University of Toronto)Lina Wadi(Ontario Institute for Cancer Research)Mona Meyer(Ontario Institute for Cancer Research)J. D. Wong(University of Toronto)Changjiang Xu(University of Toronto)Daniele Merico(Hospital for Sick Children)Gary D. Bader✉(University of Toronto)

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Bioinformatics and Genomic Networks Gene expression and cancer classification Genomics and Phylogenetic StudiesComputational biologyTroubleshootingVisualizationProtocol (science)BiologyGenomicsGenomeFunctional genomicsGenome browserBioinformatics

MeSH terms

HumansImmunity, InnateNeoplasm ProteinsNeoplasmsSoftwareGenome, HumanGene Expression Regulation, NeoplasticComputational BiologyGene Expression ProfilingProtein Interaction MappingDatabases, GeneticGene Regulatory NetworksDatasets as Topic

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g:Profiler: a web server for functional enrichment analysis and conversions of gene lists (2019 update)