article Open AccessTop 1% cited
CLARK: fast and accurate classification of metagenomic and genomic sequences using discriminative k-mers
BMC Genomics · 2015 · Vol. 16(1) · pp. 236–236
Rachid Ounit✉(University of California, Berkeley)Steve Wanamaker(University of California, Berkeley)Timothy J. Close(University of California, Berkeley)Stefano Lonardi(University of California, Berkeley)
Abstract
CLARK is a versatile, fast and accurate sequence classification method, especially useful for metagenomics and genomics applications. It is freely available at http://clark.cs.ucr.edu/ .
Genomics and Phylogenetic StudiesFractal and DNA sequence analysisMachine Learning in BioinformaticsMetagenomicsBiologyComputational biologyGenomicsk-merDNA sequencingDiscriminative modelBacterial artificial chromosomeSequence (biology)Genome
MeSH terms
AlgorithmsUser-Computer InterfaceInternetGenomicsMetagenomics
Funding
- National Science Foundation
- U.S. Department of Agriculture
Citations
679
FWCI
30.88
field-weighted impact
References
33
Percentile
100%
vs. same field & year
Citations per year
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Genome biology · 2014 · 4,784 citations
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