articleTop 1% cited
Metagenomic microbial community profiling using unique clade-specific marker genes
Nature Methods · 2012 · Vol. 9(8) · pp. 811–814
Nicola Segata✉(Harvard University)Levi Waldron(Harvard University)Annalisa Ballarini(University of Trento)Vagheesh M. Narasimhan(Harvard University)Olivier Jousson(University of Trento)Curtis Huttenhower(Harvard University)
Gut microbiota and healthGenomics and Phylogenetic StudiesProbiotics and Fermented FoodsMetagenomicsCladeBiologyShotgun sequencingComputational biologyPhylogenetic treeProfiling (computer programming)ShotgunGeneGenetics
MeSH terms
BacteriaGenetic MarkersHumansPhylogenyReproducibility of ResultsMetagenomics
Citations
1,884
FWCI
35.04
field-weighted impact
References
37
Percentile
100%
vs. same field & year
Citations per year
Cited by
The Placenta Harbors a Unique Microbiome
Science Translational Medicine · 2014 · 2,416 citations
Metagenomic and network analysis reveal wide distribution and co-occurrence of environmental antibiotic resistance genes
The ISME Journal · 2015 · 1,216 citations
Natural history of the infant gut microbiome and impact of antibiotic treatment on bacterial strain diversity and stability
Science Translational Medicine · 2016 · 1,043 citations
Expansion of intestinal Prevotella copri correlates with enhanced susceptibility to arthritis
eLife · 2013 · 2,032 citations
Using MicrobiomeAnalyst for comprehensive statistical, functional, and meta-analysis of microbiome data
Nature Protocols · 2020 · 1,775 citations
Characterization of the Gut Microbiome Using 16S or Shotgun Metagenomics
Frontiers in Microbiology · 2016 · 917 citations
Alterations in Gut Microbiota of Patients With COVID-19 During Time of Hospitalization
Gastroenterology · 2020 · 1,576 citations
Structure, function and diversity of the healthy human microbiome
Nature · 2012 · 11,749 citations
References
Basic local alignment search tool
Journal of Molecular Biology · 1990 · 93,570 citations
Introducing mothur: Open-Source, Platform-Independent, Community-Supported Software for Describing and Comparing Microbial Communities
Applied and Environmental Microbiology · 2009 · 21,514 citations
Mapping short DNA sequencing reads and calling variants using mapping quality scores
Genome Research · 2008 · 2,707 citations
MEGAN analysis of metagenomic data
Genome Research · 2007 · 3,436 citations
Search and clustering orders of magnitude faster than BLAST
Bioinformatics · 2010 · 21,473 citations
A human gut microbial gene catalogue established by metagenomic sequencing
Nature · 2010 · 11,497 citations
Integrative analysis of environmental sequences using MEGAN4
Genome Research · 2011 · 1,569 citations
Citation Network
How this paper connects to the literature. Drag to explore, click any node to open that paper.
