Scinovex
article Open AccessTop 1% cited

<scp>UCSF ChimeraX</scp>: Structure visualization for researchers, educators, and developers

Protein Science · 2020 · Vol. 30(1) · pp. 70–82
Eric F. PettersenThomas D. GoddardConrad C. HuangElaine C. MengGregory S. CouchTristan I. CrollJohn H. MorrisThomas E. Ferrin

Abstract

UCSF ChimeraX is the next-generation interactive visualization program from the Resource for Biocomputing, Visualization, and Informatics (RBVI), following UCSF Chimera. ChimeraX brings (a) significant performance and graphics enhancements; (b) new implementations of Chimera's most highly used tools, many with further improvements; (c) several entirely new analysis features; (d) support for new areas such as virtual reality, light-sheet microscopy, and medical imaging data; (e) major ease-of-use advances, including toolbars with icons to perform actions with a single click, basic "undo" capabilities, and more logical and consistent commands; and (f) an app store for researchers to contribute new tools. ChimeraX includes full user documentation and is free for noncommercial use, with downloads available for Windows, Linux, and macOS from https://www.rbvi.ucsf.edu/chimerax.

Cell Image Analysis TechniquesScientific Computing and Data ManagementAdvanced Electron Microscopy Techniques and ApplicationsUndoComputer scienceVisualizationDocumentationGraphicsImplementationComputer graphics (images)World Wide WebHuman–computer interactionSoftware engineering

MeSH terms

Computer GraphicsModels, MolecularSoftwareImaging, Three-Dimensional

Funding

  • Wellcome Trust
  • National Institutes of Health
  • University of California, San Francisco
  • National Institute of General Medical Sciences
  • National Institute of Allergy and Infectious Diseases
  • SLAC National Accelerator Laboratory
Citations
9,594
FWCI
966.62
field-weighted impact
References
40
Percentile
100%
vs. same field & year
Citations per year
Cited by
Mechanism of molnupiravir-induced SARS-CoV-2 mutagenesis
Nature Structural & Molecular Biology · 2021 · 712 citations
References
Announcing the worldwide Protein Data Bank
Nature Structural & Molecular Biology · 2003 · 3,193 citations
The Protein Data Bank
Nucleic Acids Research · 2000 · 39,191 citations
UCSF Chimera—A visualization system for exploratory research and analysis
Journal of Computational Chemistry · 2004 · 47,120 citations
UniProt: a worldwide hub of protein knowledge
Nucleic Acids Research · 2018 · 8,266 citations
Citation Network

How this paper connects to the literature. Drag to explore, click any node to open that paper.