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Guidelines for the use of flow cytometry and cell sorting in immunological studies (second edition)

European Journal of Immunology · 2019 · Vol. 49(10) · pp. 1457–1973
Andrea CossarizzaHyun‐Dong ChangAndreas RadbruchAndreas AcsDieter AdamSabine Adam‐KlagesWilliam W. AgaceNima AghaeepourMübeccel AkdişMatthieu AllezLarissa N. AlmeidaGiorgia AlvisiGraham AndersonImmanuel AndräFrancesco AnnunziatoAchille AnselmoPetra BächerCosima T. BaldariSudipto BariVincenzo BarnabaJoana Barros‐MartinsLuca BattistiniWolfgang BauerSabine BaumgartNicole BaumgarthDirk BaumjohannBianka BayingMary BebawyBurkhard BecherWolfgang BeiskerVladimı́r BenešRudi BeyaertAlfonso BlancoDominic A. BoardmanChristian BogdanJessica G BorgerGiovanna BorsellinoPhilip E. BoulaisJolene A. BradfordDirk BrennerRyan R. BrinkmanAnna E. S. BrooksDirk H. BuschMartin BüscherTimothy BushnellFederica CalzettiGarth CameronIlenia CammarataXuetao CaoSusanna CardellStefano CasolaMarco A. CassatellaAndrea CavaniAntonio CeladaLucienne ChatenoudPratip K. ChattopadhyaySue ChowEleni ChristakouLuka Čičin‐ŠainMario ClericiFederico ColomboLaura CookAnne CookeAndrea M. CooperAlexandra J. CorbettAntonio CosmaLorenzo CosmiPierre G. CoulieAna CumanoLjiljana CvetkovicVan Duc DangChantip Dang‐HeineMartin S. DaveyDerek DaviesSara De BiasiGenny Del ZottoGelo Victoriano Dela CruzMichael DelacherSilvia Della BellaPaolo DellabonaGünnur DenizMark C. DessingJames P. Di SantoAndreas DiefenbachFrancesco DieliAndreas DolfThomas DörnerRegine J. DressDiana DudziakMichael L. DustinCharles‐Antoine DutertreFriederike EbnerSidonia B. G. EckleMatthias EdingerPascale EedeGötz R. A. EhrhardtMarcus EichPablo EngelBritta EngelhardtAnna ErdeiCharlotte EsserBart EvertsMaximilien EvrardChristine S. FalkTodd A. FehnigerMar Felipo‐BenaventHelen FerryMarkus FeuererAndrew FilbyKata FilkorSimon FillatreauMarie FolloIrmgard FörsterJohn R. FosterGemma A. FouldsBritta FrehsePaul S. FrenetteStefan FrischbutterWolfgang FritzscheDavid W. GalbraithAnastasia GangaevNatalio GarbiBrice GaudillièreRicardo T. GazzinelliJens GeginatWilhelm GernerNicholas A. GherardinKamran GhoreschiLara GibelliniFlorent GinhouxKeisuke GodaDale I. GodfreyChristoph GoettlingerJosé M. González‐NavajasCarl S. GoodyearAndrea GoriJane L. GroganDaryl GrummittAndreas GrützkauClaudia HaftmannJonas HahnHamida HammadGünter J. HämmerlingLeo HansmannGöran K. HanssonChristopher M. HarpurSusanne HartmannAndrea HauserAnja E. HauserDavid L. HavilandDavid W. HedleyDaniela HernandezGuadalupe HerreraMartin HerrmannChristoph HessThomas HöferPetra HoffmannKristin A. HogquistTristan HollandThomas HölltRikard HolmdahlPleun HombrinkJessica P. HoustonBimba F. HoyerBo HuangFang‐Ping HuangJohanna E. HuberJochen HuehnMichael HundemerChristopher A. HunterWilliam Ying Khee HwangAnna IannoneFlorian IngelfingerSabine IvisonHans‐Martin JäckPéter K. JaniBeatriz JávegaStipan JonjićToralf KaiserTomáš KalinaThomas KamradtStefan H. E. KaufmannBaerbel KellerSteven L. C. KetelaarsAhad KhalilnezhadSrijit KhanJan KisielowPaul KlenermanJasmin KnopfHui‐Fern KoayKatja KobowJay K. KollsWan Ting KongManfred KöpfThomas KornKatharina KriegsmannHendy KristyantoThomas KroneisAndreas KruegerJenny F. KühneChristian KukatDésirée KunkelHeike Kunze‐SchumacherTomohiro KurosakiChristian KurtsPia KvistborgImmanuel KwokJonathan J. M. LandryOlivier LantzPaola LanutiFrancesca LaRosaAgnès LehuenSalomé LeibundGut‐LandmannMichael D. LeipoldLeslie Y. T. LeungMegan K. LevingsAndreia C. LinoFrancesco LiottaVirginia LitwinYanling LiuHans‐Gustaf LjunggrenMichael LohoffGiovanna LombardiLilly LopezMiguel López‐BotetAmy E. Lovett‐RackeErik LubbertsHervé LucheBurkhard LudewigEnrico LugliSebastian LunemannHolden T. MaeckerLaura MaggiOrla MaguireFlorian MairKerstin H. MairAlberto MantovaniRudolf A. ManzAaron J. MarshallAlicia Martínez‐RomeroGlòria MartrusIvana MarventanoWłodzimierz MaślińskiGiuseppe MatareseAnna Vittoria MattioliChristian MaueröderAlessio MazzoniJames McCluskeyMairi McGrathHelen M. McGuireIain B. McInnesHenrik E. MeiFritz MelchersSusanne MelzerDirk MielenzStephen D. MillerKingston H. G. MillsHans MindermanJenny MjösbergJonni S. MooreBarry MoranLorenzo MorettaTim R. MosmannSusann MüllerGabriele MulthoffLuis E. MuñozChristian MünzToshinori NakayamaMilena NasiKatrin NeumannLai Guan NgAntonia NiedobitekSussan NoursharghGabriel NúñezJosé‐Enrique O’ConnorAaron OchelAnna E. OjaDiana OrdonezAlberto ÓrfãoEva Orlowski‐OliverWenjun OuyangAnnette OxeniusRaghavendra PalankarIsabel PanseKovit PattanapanyasatMalte PaulsenDinko PavlinićLivius PenterPärt PetersonChristian PethJordi PétrizFederica PianconeWinfried F. PicklSilvia PiconeseMarcello PintiA. Graham PockleyMalgorzata J. PodolskaZhiyong PoonKatharina PrachtImmo PrinzCarlo PucilloSally A. QuataertLinda QuatriniKylie M. QuinnHelena RadbruchTim RadstakeSusann RahmigHans‐Peter RahnBartek RajwaGevitha RavichandranYotam RazJonathan A. RebhahnDiether RecktenwaldDorothea ReimerCaetano Reis e SousaEster B. M. RemmerswaalLisa RichterLaura G. RicoAndrew RiddellAja M. RiegerJ. Paul RobinsonChiara RomagnaniAnna RubartelliJürgen RulandArmin SaalmüllerYvan SaeysTakashi SaitoShimon SakaguchiFrancisco Sala‐de‐OyangurenYvonne SamstagSharon SandersonInga SandrockAngela SantoniR. Bellmàs SanzMarina SaresellaCatherine Sautès‐FridmanBirgit SawitzkiLinda SchadtAlexander ScheffoldHans Ulrich SchererMatthias SchiemannFrank A. SchildbergEsther SchimiskyAndreas SchlitzerJosephine SchlosserStephan SchmidSteffen SchmittKilian SchoberDaniel SchraivogelWolfgang SchuhThomas SchülerReiner SchulteAxel SchulzSebastian SchulzCristiano ScottàDaniel Scott‐AlgaraDavid P. SesterT. Vincent ShankeyBruno Silva‐SantosAnna Katharina SimonKatarzyna SitnikSilvano SozzaniDaniel E. SpeiserJosef ŠpidlenAnders StåhlbergAlan M. StallNatalie StanleyRegina StarkChristina StehleTobit SteinmetzHannes StockingerYousuke TakahamaKiyoshi TakedaLeonard TanAttila TárnokGisa TiegsGergely ToldiJulia TornackElisabetta TraggiaiMohamed TrebakTimothy TreeJoe TrotterJohn TrowsdaleMaria TsoumakidouHenning UlrichSophia UrbanczykWillem van de VeenMaries van den BroekEdwin van der PolSofie Van GassenGert Van IsterdaelRené A. W. van LierMarc VeldhoenSalvador Vento‐AsturiasPaulo VieiraDavid VoehringerHans‐Dieter VolkAnouk von BorstelKonrad von VolkmannAri WaismanRachael WalkerPaul K. WallaceSa A. WangXin WangMichael D. WardKirsten A. Ward‐HartstongeKlaus WarnatzGary WarnesSarah WarthClaudia WaskowJames WatsonCarsten WatzlLeonie WegenerThomas WeisenburgerAnnika WiedemannJürgen WienandsAnneke WilharmRobert J. WilkinsonGerald WillimskyJames B. WingRieke WinkelmannThomas WinklerOliver F. WirzAlicia Y. W. WongPeter WurstJennie H. M. YangJuhao YangMaria YazdanbakhshLiping YuAlice YueHanlin ZhangYi ZhaoSusanne ZieglerChristina E. ZielinskiJakob ZimmermannArturo Zychlinsky

Abstract

These guidelines are a consensus work of a considerable number of members of the immunology and flow cytometry community. They provide the theory and key practical aspects of flow cytometry enabling immunologists to avoid the common errors that often undermine immunological data. Notably, there are comprehensive sections of all major immune cell types with helpful Tables detailing phenotypes in murine and human cells. The latest flow cytometry techniques and applications are also described, featuring examples of the data that can be generated and, importantly, how the data can be analysed. Furthermore, there are sections detailing tips, tricks and pitfalls to avoid, all written and peer-reviewed by leading experts in the field, making this an essential research companion.

Immune Cell Function and InteractionT-cell and B-cell ImmunologySingle-cell and spatial transcriptomicsFlow cytometryMass cytometrySortingBiologyCytometryComputational biologyImmunologyComputer scienceData sciencePhenotype

MeSH terms

Allergy and ImmunologyCell SeparationFlow CytometryHumansPhenotypeConsensus

Funding

  • Medical Research Council
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