article Open AccessTop 1% cited
GOrilla: a tool for discovery and visualization of enriched GO terms in ranked gene lists
BMC Bioinformatics · 2009 · Vol. 10(1) · pp. 48–48
Eran Eden✉(Weizmann Institute of Science)Roy Navon(Tel Aviv University)Israel Steinfeld(Technion – Israel Institute of Technology)Doron Lipson(Technion – Israel Institute of Technology)Zohar Yakhini(Technion – Israel Institute of Technology)
Abstract
GOrilla is an efficient GO analysis tool with unique features that make a useful addition to the existing repertoire of GO enrichment tools. GOrilla's unique features and advantages over other threshold free enrichment tools include rigorous statistics, fast running time and an effective graphical representation. GOrilla is publicly available at: http://cbl-gorilla.cs.technion.ac.il
Bioinformatics and Genomic NetworksGene expression and cancer classificationBiomedical Text Mining and OntologiesSet (abstract data type)Computer scienceAnnotationVariety (cybernetics)Data miningGorillaVisualizationExpression (computer science)DNA microarrayInformation retrieval
MeSH terms
AlgorithmsAnimalsData Interpretation, StatisticalGenesHumansModels, GeneticTerminology as TopicSoftwareUser-Computer InterfaceYeastsModels, StatisticalInformation Storage and RetrievalArabidopsisComputational BiologyInternet
Funding
- European Commission
Citations
3,658
FWCI
20.30
field-weighted impact
References
21
Percentile
100%
vs. same field & year
Citations per year
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References
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Nature · 2002 · 9,574 citations
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Proceedings of the National Academy of Sciences · 2005 · 55,472 citations
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