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GOrilla: a tool for discovery and visualization of enriched GO terms in ranked gene lists

BMC Bioinformatics · 2009 · Vol. 10(1) · pp. 48–48
Eran EdenRoy NavonIsrael SteinfeldDoron LipsonZohar Yakhini

Abstract

GOrilla is an efficient GO analysis tool with unique features that make a useful addition to the existing repertoire of GO enrichment tools. GOrilla's unique features and advantages over other threshold free enrichment tools include rigorous statistics, fast running time and an effective graphical representation. GOrilla is publicly available at: http://cbl-gorilla.cs.technion.ac.il

Bioinformatics and Genomic NetworksGene expression and cancer classificationBiomedical Text Mining and OntologiesSet (abstract data type)Computer scienceAnnotationVariety (cybernetics)Data miningGorillaVisualizationExpression (computer science)DNA microarrayInformation retrieval

MeSH terms

AlgorithmsAnimalsData Interpretation, StatisticalGenesHumansModels, GeneticTerminology as TopicSoftwareUser-Computer InterfaceYeastsModels, StatisticalInformation Storage and RetrievalArabidopsisComputational BiologyInternet

Funding

  • European Commission
Citations
3,658
FWCI
20.30
field-weighted impact
References
21
Percentile
100%
vs. same field & year
Citations per year
References
Discovering Motifs in Ranked Lists of DNA Sequences
PLoS Computational Biology · 2007 · 756 citations
Gene Ontology: tool for the unification of biology
Nature Genetics · 2000 · 43,975 citations
Gene set enrichment analysis: A knowledge-based approach for interpreting genome-wide expression profiles
Proceedings of the National Academy of Sciences · 2005 · 55,472 citations
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