article Open AccessTop 1% cited
Multiplex PCR method for MinION and Illumina sequencing of Zika and other virus genomes directly from clinical samples
Nature Protocols · 2017 · Vol. 12(6) · pp. 1261–1276
Joshua Quick✉(University of Birmingham)Nathan D. Grubaugh(Scripps Research Institute)Steven T. Pullan(Public Health England)Ingra Morales Claro(Universidade de São Paulo)Andrew D. Smith(University of Birmingham)Karthik Gangavarapu(Scripps Research Institute)Glenn Oliveira(Scripps Research Institute)Refugio Robles‐Sikisaka(Scripps Research Institute)Thomas F. Rogers(Scripps Research Institute)Nathan Beutler(Scripps Research Institute)Dennis R. Burton(Scripps Research Institute)Lia Laura Lewis‐Ximenez(Fundação Oswaldo Cruz)Jaqueline Góes de Jesus(Fundação Oswaldo Cruz)Marta Giovanetti(University of Rome Tor Vergata)Sarah C. Hill(University of Oxford)Allison Black(University of Washington)Trevor Bedford(Fred Hutch Cancer Center)Miles W. Carroll(Southampton General Hospital)Márcio Roberto Teixeira Nunes(Instituto Evandro Chagas)Luíz Carlos Júnior Alcântara(Fundação Oswaldo Cruz)Éster Cerdeira Sabino(Universidade de São Paulo)Sally A. Baylis(Paul Ehrlich Institut)Nuno R. Faria(University of Oxford)Matthew Loose(University of Nottingham)Jared T. SimpsonOliver G. Pybus(University of Oxford)Kristian G. Andersen(Scripps Research Institute)Nicholas J. Loman(University of Birmingham)
Mosquito-borne diseases and controlVirology and Viral DiseasesInsect symbiosis and bacterial influencesMinionGenomeNanopore sequencingBiologyComputational biologyMetagenomicsDNA sequencingMultiplexZika virusIn silico PCR
MeSH terms
DNA VirusesRNA VirusesGenome, ViralSequence Analysis, DNAMolecular EpidemiologyMultiplex Polymerase Chain Reaction
Funding
- National Science Foundation
- United States Agency for International Development
- Wellcome Trust
- National Institutes of Health
- Medical Research Council
- National Institute of Allergy and Infectious Diseases
Citations
1,277
FWCI
91.77
field-weighted impact
References
61
Percentile
100%
vs. same field & year
Citations per year
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References
Integrative genomics viewer
Nature Biotechnology · 2011 · 16,203 citations
The Sequence Alignment/Map format and SAMtools
Bioinformatics · 2009 · 66,208 citations
Sequencing technologies — the next generation
Nature Reviews Genetics · 2009 · 7,001 citations
Trimmomatic: a flexible trimmer for Illumina sequence data
Bioinformatics · 2014 · 67,908 citations
Coming of age: ten years of next-generation sequencing technologies
Nature Reviews Genetics · 2016 · 4,335 citations
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