article Open AccessTop 1% cited
APE: Analyses of Phylogenetics and Evolution in R language
Bioinformatics · 2004 · Vol. 20(2) · pp. 289–290
Emmanuel Paradis✉(Institut des Sciences de l'Evolution de Montpellier)Julien ClaudeKorbinian Strimmer(Ludwig-Maximilians-Universität München)
Abstract
The program is free and available from the official R package archive at http://cran.r-project.org/src/contrib/PACKAGES.html#ape. APE is licensed under the GNU General Public License.
Evolution and Paleontology StudiesGenetic diversity and population structureGenomics and Phylogenetic StudiesPhylogenetic treePhylogeneticsComputer scienceR packageEvolutionary biologyPopulationBiologyProgramming languageGeneticsGene
MeSH terms
Computer GraphicsBiological EvolutionGenetics, PopulationPhylogenyProgramming LanguagesSoftwareUser-Computer InterfaceEvolution, MolecularGene Expression Profiling
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References
A Nonparametric Approach to Estimating Divergence Times in the Absence of Rate Constancy
Molecular Biology and Evolution · 1997 · 1,188 citations
Phylogenies and the Comparative Method
The American Naturalist · 1985 · 10,019 citations
Testing macro–evolutionary models using incomplete molecular phylogenies
Proceedings of the Royal Society B Biological Sciences · 2000 · 833 citations
The reconstructed evolutionary process
Philosophical Transactions of the Royal Society B Biological Sciences · 1994 · 865 citations
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