article Open AccessTop 1% cited
The variant call format and VCFtools
Bioinformatics · 2011 · Vol. 27(15) · pp. 2156–2158
Petr Danecek(Broad Institute)Adam Auton(Broad Institute)Gonçalo R. Abecasis(Centre for Human Genetics)Cornelis A. Albers(Centre for Human Genetics)Eric Banks(Centre for Human Genetics)Mark A. DePristo(Centre for Human Genetics)Robert E. Handsaker(Broad Institute)Gerton Lunter(Wellcome Sanger Institute)Gábor Marth(Broad Institute)Stephen T. Sherry(Centre for Human Genetics)Gil McVean(Centre for Human Genetics)Richard Durbin✉(Centre for Human Genetics)1000 Genomes Project Analysis Group
Abstract
http://vcftools.sourceforge.net
Genomics and Phylogenetic StudiesMachine Learning in BioinformaticsGene expression and cancer classificationdbSNPPerlComputer scienceSuiteSoftwareExomeAnnotationExome sequencingWorld Wide WebSingle-nucleotide polymorphism
MeSH terms
AllelesGenotypeHumansSoftwareGenetic VariationGenome, HumanInformation Storage and RetrievalGenomics
Funding
- Wellcome Trust
- British Heart Foundation
- National Institutes of Health
- Medical Research Council
- U.S. National Library of Medicine
Citations
17,263
FWCI
60.82
field-weighted impact
References
5
Percentile
100%
vs. same field & year
Citations per year
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References
The Sequence Alignment/Map format and SAMtools
Bioinformatics · 2009 · 66,208 citations
The Genome Analysis Toolkit: A MapReduce framework for analyzing next-generation DNA sequencing data
Genome Research · 2010 · 29,447 citations
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