article Open AccessTop 1% cited
Search and clustering orders of magnitude faster than BLAST
Bioinformatics · 2010 · Vol. 26(19) · pp. 2460–2461
R. C. Edgar✉(Tiburon Associates (United States))
Abstract
Binaries are available at no charge for non-commercial use at http://www.drive5.com/usearch.
Genomics and Phylogenetic StudiesMachine Learning in BioinformaticsAlgorithms and Data CompressionCluster analysisComputer scienceSequence (biology)Sensitivity (control systems)Data miningExploitPattern recognition (psychology)Machine learningArtificial intelligenceBiology
MeSH terms
AlgorithmsProteinsCluster AnalysisSequence AlignmentComputational BiologySequence Analysis, ProteinDatabases, Protein
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References
Basic local alignment search tool
Journal of Molecular Biology · 1990 · 93,570 citations
MUSCLE: multiple sequence alignment with high accuracy and high throughput
Nucleic Acids Research · 2004 · 45,964 citations
The Pfam Protein Families Database
Nucleic Acids Research · 2002 · 14,220 citations
Cd-hit: a fast program for clustering and comparing large sets of protein or nucleotide sequences
Bioinformatics · 2006 · 11,865 citations
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