article Open AccessTop 1% cited
Transcriptome sequencing in an ecologically important tree species: assembly, annotation, and marker discovery
BMC Genomics · 2010 · Vol. 11(1) · pp. 180–180
Thomas L. Parchman✉(University of Wyoming)Katherine S. Geist(Beloit College)Johan A. GrahnenCraig W. Benkman(University of Wyoming)C. Alex Buerkle(University of Wyoming)
Abstract
This sequence collection represents a major genomic resource for P. contorta, and the large number of genetic markers characterized should contribute to future research in this and other pines. Our results illustrate the utility of next generation sequencing as a basis for marker development and population genomics in non-model species.
Genomics and Phylogenetic StudiesMolecular Biology Techniques and ApplicationsPlant Disease Resistance and GeneticsBiologyContigPinus contortaGenomeGeneticsExpressed sequence tagComputational biologyDNA sequencingGenomicsEvolutionary biology
MeSH terms
Genetic MarkersTreesGenes, PlantSequence Analysis, DNADNA PrimersDNA, ComplementaryMinisatellite RepeatsRetroelementsDNA, PlantGenome, PlantExpressed Sequence TagsContig MappingPolymorphism, Single NucleotideGene Expression ProfilingGenomics
Funding
- National Science Foundation
- University of Wyoming
- National Institutes of Health
- Division of Biological Infrastructure
- Division of Environmental Biology
Citations
449
FWCI
26.37
field-weighted impact
References
74
Percentile
100%
vs. same field & year
Citations per year
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