article Open AccessTop 1% cited
Sequencing and de novo analysis of a coral larval transcriptome using 454 GSFlx
BMC Genomics · 2009 · Vol. 10(1) · pp. 219–219
Eli Meyer✉(The University of Texas at Austin)Galina V. Aglyamova(The University of Texas at Austin)Shi Wang(The University of Texas at Austin)Jade Carter(Indiana University Bloomington)David Abrego(ARC Centre of Excellence for Coral Reef Studies)John K. Colbourne(Indiana University Bloomington)Bette L. Willis(James Cook University)Mikhail V. Matz(The University of Texas at Austin)
Abstract
The methods described here for deep sequencing of the transcriptome should be widely applicable to generate catalogs of genes and genetic markers in emerging model organisms. Our data provide the most comprehensive sequence resource currently available for reef-building corals, and include an extensive collection of potential genetic markers for association and population connectivity studies. The characterization of the larval transcriptome for this widely-studied coral will enable research into the biological processes underlying stress responses in corals and evolutionary adaptation to global climate change.
Coral and Marine Ecosystems StudiesMarine Sponges and Natural ProductsIchthyology and Marine BiologyBiologyDe novo transcriptome assemblyTranscriptomeGenomeGeneGeneticsComputational biologyGenomicsSequence assemblyDeep sequencing
MeSH terms
AnimalsGene LibraryCluster AnalysisSequence Analysis, DNAComputational BiologyContig MappingPolymorphism, Single NucleotideGene Expression ProfilingGenomicsAnthozoa
Funding
- Eli Lilly and Company
- Lilly Endowment
Citations
506
FWCI
63.76
field-weighted impact
References
49
Percentile
100%
vs. same field & year
Citations per year
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