article Open AccessTop 1% cited
A novel and universal method for microRNA RT-qPCR data normalization
Genome biology · 2009 · Vol. 10(6) · pp. R64–R64
Pieter Mestdagh✉(Ghent University Hospital)Pieter Van Vlierberghe(Ghent University Hospital)An De Weer(Ghent University Hospital)Daniel Muth(German Cancer Research Center)Frank Westermann(German Cancer Research Center)Frank Speleman(Ghent University Hospital)Jo Vandesompele(Ghent University Hospital)
Abstract
Gene expression analysis of microRNA molecules is becoming increasingly important. In this study we assess the use of the mean expression value of all expressed microRNAs in a given sample as a normalization factor for microRNA real-time quantitative PCR data and compare its performance to the currently adopted approach. We demonstrate that the mean expression value outperforms the current normalization strategy in terms of better reduction of technical variation and more accurate appreciation of biological changes.
MicroRNA in disease regulationCancer-related molecular mechanisms researchRNA Research and SplicingBiologyNormalization (sociology)Human geneticsComputational biologymicroRNAGenome BiologyGeneticsEvolutionary biologyBioinformaticsGenomics
MeSH terms
N-Myc Proto-Oncogene ProteinAlgorithmsFalse Positive ReactionsHumansNeuroblastomaNuclear ProteinsOncogene ProteinsDown-RegulationGene Expression Regulation, NeoplasticStatistics, NonparametricReverse Transcriptase Polymerase Chain ReactionMicroRNAsCell Line, Tumor
Funding
- Universiteit Gent
Citations
1,026
FWCI
16.26
field-weighted impact
References
47
Percentile
99%
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Citations per year
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