article Open AccessTop 1% cited
SolexaQA: At-a-glance quality assessment of Illumina second-generation sequencing data
BMC Bioinformatics · 2010 · Vol. 11(1) · pp. 485–485
Murray P. Cox✉(Massey University)Daniel A. Peterson(Massey University)Patrick J. Biggs(Massey University)
Abstract
The SolexaQA package produces standardized outputs within minutes, thus facilitating ready comparison between flow cell lanes and machine runs, as well as providing immediate diagnostic information to guide the manipulation of sequence data for downstream analyses.
Genomics and Phylogenetic StudiesMolecular Biology Techniques and ApplicationsGene expression and cancer classificationComputer scienceDownstream (manufacturing)SoftwareDNA sequencingGraphicsData miningSoftware packageR packageSequence (biology)Quality (philosophy)
MeSH terms
Base SequenceSoftwareSequence Analysis, DNASequence Analysis, RNAInternet
Funding
- Royal Society
- Royal Society Te Apārangi
- Massey University
- Marsden Fund
Citations
1,390
FWCI
14.06
field-weighted impact
References
9
Percentile
99%
vs. same field & year
Citations per year
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References
Sequencing technologies — the next generation
Nature Reviews Genetics · 2009 · 7,001 citations
Velvet: Algorithms for de novo short read assembly using de Bruijn graphs
Genome Research · 2008 · 9,674 citations
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