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PEAR: a fast and accurate Illumina Paired-End reAd mergeR

Bioinformatics · 2013 · Vol. 30(5) · pp. 614–620
Jiajie ZhangKassian KobertTomáš FlouriAlexandros Stamatakis

Abstract

PEAR is implemented in C and uses POSIX threads. It is freely available at http://www.exelixis-lab.org/web/software/pear.

Genomics and Phylogenetic StudiesEnvironmental DNA in Biodiversity StudiesMicrobial Community Ecology and PhysiologyComputer sciencePEARSoftwareMerge (version control)Fragment (logic)AlgorithmParallel computingOperating systemWorld Wide Web

MeSH terms

SoftwareStaphylococcus aureusSequence AlignmentSequence Analysis, DNAGenomicsHigh-Throughput Nucleotide Sequencing

Funding

  • Deutsche Forschungsgemeinschaft
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PEAR: a fast and accurate Illumina Paired-End reAd mergeR · Scinovex