article Open AccessTop 1% cited
Quality control and preprocessing of metagenomic datasets
Bioinformatics · 2011 · Vol. 27(6) · pp. 863–864
Robert Schmieder✉(Argonne National Laboratory)Robert A. Edwards(Argonne National Laboratory)
Abstract
This open-source application was implemented in Perl and can be used as a stand alone version or accessed online through a user-friendly web interface. The source code, user help and additional information are available at http://prinseq.sourceforge.net/.
Genomics and Phylogenetic StudiesGene expression and cancer classificationMetabolomics and Mass Spectrometry StudiesPerlComputer sciencePreprocessorMetagenomicsGraphical user interfaceSource codeOpen sourceVariety (cybernetics)SoftwareInterface (matter)
MeSH terms
Computer GraphicsProgramming LanguagesQuality ControlSoftwareInformation Storage and RetrievalSequence Analysis, DNAInternetMetagenomics
Funding
- National Science Foundation
Citations
5,319
FWCI
37.00
field-weighted impact
References
7
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100%
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References
SolexaQA: At-a-glance quality assessment of Illumina second-generation sequencing data
BMC Bioinformatics · 2010 · 1,390 citations
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