review Open AccessTop 1% cited
Repetitive DNA and next-generation sequencing: computational challenges and solutions
Nature Reviews Genetics · 2011 · Vol. 13(1) · pp. 36–46
Todd J. Treangen✉Steven L. Salzberg(Johns Hopkins University)
Genomics and Phylogenetic StudiesRNA and protein synthesis mechanismsChromosomal and Genetic VariationsBiologyDNA sequencingComputational biologyHybrid genome assemblyGenomeSequence (biology)Repeated sequencePerspective (graphical)Sequence assemblyCover (algebra)
MeSH terms
AlgorithmsAnimalsDNAHumansMolecular Sequence DataPlantsRepetitive Sequences, Nucleic AcidRNASoftwareReproducibility of ResultsSequence AlignmentGenomeSequence Analysis, DNASequence Analysis, RNAComputational Biology
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Bioinformatics · 2009 · 66,208 citations
Mapping short DNA sequencing reads and calling variants using mapping quality scores
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