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Reproducible, interactive, scalable and extensible microbiome data science using QIIME 2

Nature Biotechnology · 2019 · Vol. 37(8) · pp. 852–857

Evan Bolyen✉(Northern Arizona University)Jai Ram Rideout(Northern Arizona University)Matthew R. Dillon(Northern Arizona University)Nicholas A. Bokulich(Northern Arizona University)Christian C. Abnet(National Cancer Institute)Gabriel A. Al‐Ghalith(University of Minnesota)Harriet Alexander(Woods Hole Oceanographic Institution)Eric J. Alm(Massachusetts Institute of Technology)Manimozhiyan Arumugam(University of Copenhagen)Francesco Asnicar(University of Trento)Yang Bai(Chinese Academy of Sciences)Jordan E. Bisanz(University of California, San Francisco)Kyle Bittinger(Children's Hospital of Philadelphia)Asker Brejnrod(University of Copenhagen)Colin Brislawn(Pacific Northwest National Laboratory)C. Titus Brown(University of California, Davis)Benjamin J. Callahan(North Carolina State University)Andrés Mauricio Caraballo‐Rodríguez(University of California San Diego)John Chase(Northern Arizona University)Emily K. Cope(Northern Arizona University)Ricardo Silva(University of California San Diego)Christian Diener(Institute for Systems Biology)Pieter C. Dorrestein(University of California San Diego)Gavin M. Douglas(Dalhousie University)Daniel M. Durall(University of British Columbia)Claire Duvallet(Massachusetts Institute of Technology)Christian F. Edwardson(Shedd Aquarium)Madeleine Ernst(Statens Serum Institut)Mehrbod Estaki(University of British Columbia)Jennifer Fouquier(University of Colorado Anschutz Medical Campus)Julia M. Gauglitz(University of California San Diego)Sean M. Gibbons(University of Washington)Deanna L. Gibson(University of British Columbia)Antonio González(University of California San Diego)Kestrel Gorlick(Northern Arizona University)Jiarong Guo(Michigan State University)Benjamin Hillmann(University of Minnesota)Susan Holmes(Palo Alto University)Hannes Holste(University of California San Diego)Curtis Huttenhower(Broad Institute)Gavin Huttley(Australian National University)Stefan Janssen(Heinrich Heine University Düsseldorf)Alan K. Jarmusch(University of California San Diego)Lingjing Jiang(University of California San Diego)Benjamin D. Kaehler(Australian National University)Kyo Bin Kang(Sookmyung Women's University)Christopher R. Keefe(Northern Arizona University)Paul Keim(Northern Arizona University)Scott T. Kelley(San Diego State University)Dan Knights(University of Minnesota)Irina Koester(Scripps Institution of Oceanography)Tomasz Kościółek(University of California San Diego)Jorden Kreps(Northern Arizona University)Morgan G. I. Langille(Dalhousie University)Joslynn S. Lee(Howard Hughes Medical Institute)Ruth E. Ley(Cornell University)Yongxin Liu(Chinese Academy of Sciences)Erikka Loftfield(National Cancer Institute)Catherine Lozupone(University of Colorado Anschutz Medical Campus)Massoud Maher(University of California San Diego)Clarisse Marotz(University of California San Diego)Bryan D Martin(University of Washington)Daniel McDonald(University of California San Diego)Lauren J. McIver(Broad Institute)Alexey V. Melnik(University of California San Diego)Jessica L. Metcalf(Colorado State University)Sydney Morgan(University of British Columbia)Jamie Morton(University of California San Diego)Ahmad Turan Naimey(Northern Arizona University)José A. Navas-Molina(Google (United States))Louis‐Félix Nothias(University of California San Diego)Stephanie B. Orchanian(University of California San Diego)Talima Pearson(Northern Arizona University)Samuel L Peoples(University of Washington Bothell)Daniel Petras(University of California San Diego)Mary L. Preuss(Webster University)Elmar Pruesse(University of Colorado Anschutz Medical Campus)Lasse Buur Rasmussen(University of Copenhagen)Adam R. Rivers(Agricultural Research Service)Michael S. Robeson(University of Arkansas for Medical Sciences)Patrick Rosenthal(Webster University)Nicola Segata(University of Trento)Michael Shaffer(University of Colorado Anschutz Medical Campus)Arron Shiffer(Northern Arizona University)Rashmi Sinha(National Cancer Institute)Se Jin Song(University of California San Diego)John R. Spear(Colorado School of Mines)Austin D. Swafford(University of California San Diego)Luke Thompson(National Oceanic and Atmospheric Administration)Pedro J. Torres(San Diego State University)Pauline Trinh(University of Washington)Anupriya Tripathi(University of California San Diego)Peter J. Turnbaugh(University of California, San Francisco)Sabah Ul-Hasan(University of California, Merced)Justin J. J. van der Hooft(Wageningen University & Research)Fernando Vargas(University of California San Diego)Yoshiki Vázquez‐Baeza(University of California San Diego)Emily Vogtmann(National Cancer Institute)Max von Hippel(University of Arizona)William A. Walters(Max Planck Institute for Developmental Biology)Yunhu Wan(National Cancer Institute)Mingxun Wang(University of California San Diego)Jonathan Warren(Environment Agency)Kyle C. Weber(Agricultural Research Service)Charles H. D. Williamson(Northern Arizona University)Amy D. Willis(University of Washington)Zhenjiang Zech Xu(University of California San Diego)Jesse Zaneveld(University of Washington Bothell)Yilong Zhang(Merck & Co., Inc., Rahway, NJ, USA (United States))Qiyun Zhu(University of California San Diego)Rob Knight(University of California San Diego)J. Gregory Caporaso(Northern Arizona University)

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Gut microbiota and health Metabolomics and Mass Spectrometry Studies Gene expression and cancer classificationMicrobiomeScalabilityExtensibilityComputer scienceComputational biologyData scienceBiologyBioinformaticsDatabaseProgramming language