article Open AccessTop 1% cited
Nextstrain: real-time tracking of pathogen evolution
Bioinformatics · 2018 · Vol. 34(23) · pp. 4121–4123
James Hadfield✉(Fred Hutch Cancer Center)Colin Megill(Fred Hutch Cancer Center)Sidney M. Bell(University of Washington)John Huddleston(Fred Hutch Cancer Center)Barney Potter(Fred Hutch Cancer Center)Charlton Callender(Fred Hutch Cancer Center)Pavel Sagulenko(Max Planck Institute for Developmental Biology)Trevor Bedford(Fred Hutch Cancer Center)Richard A. Neher(Max Planck Institute for Developmental Biology)
Abstract
All code (predominantly JavaScript and Python) is freely available from github.com/nextstrain and the web-application is available at nextstrain.org.
Genomics and Phylogenetic StudiesPlant Virus Research StudiesEvolution and Genetic DynamicsViral phylodynamicsVisualizationPython (programming language)JavaScriptComputer scienceGenomePublic healthData scienceWorld Wide WebPhylogenetic tree
MeSH terms
SoftwareVirusesGenome, ViralEvolution, MolecularComputational BiologyDatabases, Genetic
Funding
- National Science Foundation
- Society for Mathematical Biology
- National Institutes of Health
- H2020 European Research Council
Citations
3,363
FWCI
135.50
field-weighted impact
References
11
Percentile
100%
vs. same field & year
Citations per year
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