reviewTop 1% cited
Best practices for analysing microbiomes
Nature Reviews Microbiology · 2018 · Vol. 16(7) · pp. 410–422
Rob Knight✉(University of California San Diego)Alison Vrbanac(University of California San Diego)Bryn C. Taylor(University of California San Diego)Alexander A. Aksenov(University of California San Diego)Chris Callewaert(Ghent University)Justine W. Debelius(University of California San Diego)Antonio González(University of California San Diego)Tomasz Kościółek(University of California San Diego)Laura-Isobel McCall(University of California San Diego)Daniel McDonald(University of California San Diego)Alexey V. Melnik(University of California San Diego)James T. Morton(University of California San Diego)J.I. Navas(University of California San Diego)Robert A. Quinn(University of California San Diego)Jon G. Sanders(University of California San Diego)Austin D. Swafford(University of California San Diego)Luke Thompson(NOAA National Marine Fisheries Service)Anupriya Tripathi(University of California San Diego)Zhenjiang Zech Xu(University of California San Diego)Jesse Zaneveld(University of Washington Bothell)Qiyun Zhu(University of California San Diego)J. Gregory Caporaso(Northern Arizona University)Pieter C. Dorrestein(University of California San Diego)
Gut microbiota and healthMetabolomics and Mass Spectrometry StudiesProbiotics and Fermented FoodsBiologyMicrobiomeComputational biologyEvolutionary biologyGenetics
MeSH terms
AnimalsBacteriaEnvironmental MicrobiologyHumansReproducibility of ResultsMetagenomicsMicrobiota
Citations
1,823
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References
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References
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Nature Methods · 2015 · 2,390 citations
Sparse and Compositionally Robust Inference of Microbial Ecological Networks
PLoS Computational Biology · 2015 · 1,814 citations
Improved annotation of antibiotic resistance determinants reveals microbial resistomes cluster by ecology
The ISME Journal · 2014 · 676 citations
Obesity alters gut microbial ecology
Proceedings of the National Academy of Sciences · 2005 · 6,096 citations
Waste Not, Want Not: Why Rarefying Microbiome Data Is Inadmissible
PLoS Computational Biology · 2014 · 3,022 citations
Modulation of gut microbiota during probiotic-mediated attenuation of metabolic syndrome in high fat diet-fed mice
The ISME Journal · 2014 · 821 citations
Fast UniFrac: facilitating high-throughput phylogenetic analyses of microbial communities including analysis of pyrosequencing and PhyloChip data
The ISME Journal · 2009 · 1,118 citations
Bayesian community-wide culture-independent microbial source tracking
Nature Methods · 2011 · 1,890 citations
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