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The Microbiota-Gut-Brain Axis

Physiological Reviews · 2019 · Vol. 99(4) · pp. 1877–2013
John F. CryanKenneth J. O’RiordanCaitlin S.M. CowanKiran V. SandhuThomaz F. S. BastiaanssenMarcus BoehmeMartin G. CodagnoneSofia CussottoChristine FüllingAnna V. GolubevaKatherine E. GuzzettaMinal JaggarCaitríona M. Long-SmithJoshua M. LyteJason MartinAlicia Molinero-PerezGerard M. MoloneyEmanuela MorelliEnrique MorillasRory O’ConnorJoana S. Cruz-PereiraVeronica L. PetersonKieran ReaNathaniel L. RitzEoin SherwinSimon SpichakEmily M. TeichmanMarcel van de WouwAna Paula Ventura‐SilvaShauna E. Wallace-FitzsimonsNiall P. HylandGerard ClarkeTimothy G. Dinan

Abstract

The importance of the gut-brain axis in maintaining homeostasis has long been appreciated. However, the past 15 yr have seen the emergence of the microbiota (the trillions of microorganisms within and on our bodies) as one of the key regulators of gut-brain function and has led to the appreciation of the importance of a distinct microbiota-gut-brain axis. This axis is gaining ever more traction in fields investigating the biological and physiological basis of psychiatric, neurodevelopmental, age-related, and neurodegenerative disorders. The microbiota and the brain communicate with each other via various routes including the immune system, tryptophan metabolism, the vagus nerve and the enteric nervous system, involving microbial metabolites such as short-chain fatty acids, branched chain amino acids, and peptidoglycans. Many factors can influence microbiota composition in early life, including infection, mode of birth delivery, use of antibiotic medications, the nature of nutritional provision, environmental stressors, and host genetics. At the other extreme of life, microbial diversity diminishes with aging. Stress, in particular, can significantly impact the microbiota-gut-brain axis at all stages of life. Much recent work has implicated the gut microbiota in many conditions including autism, anxiety, obesity, schizophrenia, Parkinson's disease, and Alzheimer's disease. Animal models have been paramount in linking the regulation of fundamental neural processes, such as neurogenesis and myelination, to microbiome activation of microglia. Moreover, translational human studies are ongoing and will greatly enhance the field. Future studies will focus on understanding the mechanisms underlying the microbiota-gut-brain axis and attempt to elucidate microbial-based intervention and therapeutic strategies for neuropsychiatric disorders.

Gut microbiota and healthTryptophan and brain disordersGastrointestinal motility and disordersGut–brain axisGut floraNeuroscienceBiologyMicrobiomeImmune systemDiseaseAutismImmunologyBioinformatics

MeSH terms

Gastrointestinal MicrobiomeAge FactorsAgingAnimalsBacteriaBehaviorBrainBrain DiseasesHumansIntestinesNeuronal PlasticityRisk FactorsNeuroimmunomodulationEnteric Nervous SystemHost-Pathogen Interactions

Funding

  • Science Foundation Ireland
Citations
4,495
FWCI
133.46
field-weighted impact
References
1,676
Percentile
100%
vs. same field & year
Citations per year
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References
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