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Integrated Molecular Meta-Analysis of 1,000 Pediatric High-Grade and Diffuse Intrinsic Pontine Glioma

Cancer Cell · 2017 · Vol. 32(4) · pp. 520–537.e5
Alan MackayAnna BurfordDiana CarvalhoElisa IzquierdoJanat Fazal-SalomKathryn R. TaylorLynn BjerkeMatthew ClarkeMaria VinciMeera NandhabalanSara TemelsoSergey PopovValeria MolinariPichai RamanAngela J. WaandersHarry J. HanSaumya GuptaLynley V. MarshallStergios ZacharoulisSucheta VaidyaHenry MandevilleLeslie BridgesAndrew J. MartinSafa Al‐SarrajChristopher ChandlerHo‐Keung NgXingang LiKun MuSaoussen TrabelsiDorra H’mida-Ben BrahimAlexei N. KisljakovД. М. КоноваловAndrew S. MooreÁngel M. CarcabosoMariona SuñolCarmen de TorresOfelia CruzJaume MoraЛ. И. ШацJoão N. StávaleLucas Tadeu BidinottoRui Manuel ReisNatacha Entz‐WerléMichael FarrellJane CryanDarach CrimminsJohn CairdJane PearsMichelle MonjeMarie‐Anne DebilyDavid CastelJacques GrillCynthia HawkinsHamid NikbakhtNada JabadoSuzanne J. BakerStefan M. PfisterDavid JonesMaryam FouladiAndré O. von BuerenMichael BaudisAdam ResnickChris Jones

Abstract

We collated data from 157 unpublished cases of pediatric high-grade glioma and diffuse intrinsic pontine glioma and 20 publicly available datasets in an integrated analysis of >1,000 cases. We identified co-segregating mutations in histone-mutant subgroups including loss of FBXW7 in H3.3G34R/V, TOP3A rearrangements in H3.3K27M, and BCOR mutations in H3.1K27M. Histone wild-type subgroups are refined by the presence of key oncogenic events or methylation profiles more closely resembling lower-grade tumors. Genomic aberrations increase with age, highlighting the infant population as biologically and clinically distinct. Uncommon pathway dysregulation is seen in small subsets of tumors, further defining the molecular diversity of the disease, opening up avenues for biological study and providing a basis for functionally defined future treatment stratification.

MeSH terms

F-Box-WD Repeat-Containing Protein 7AdolescentChildChild, PreschoolDNA Topoisomerases, Type IFemaleGliomaHistonesHumansInfantInfant, NewbornMaleMutationProto-Oncogene ProteinsRepressor Proteins

Funding

  • Pediatric Brain Tumor Foundation
  • Cure Starts Now Foundation
  • Cancer Research UK
  • CHILDREN with CANCER UK
  • Brain Tumour Charity
  • National Institutes of Health
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Integrated Molecular Meta-Analysis of 1,000 Pediatric High-Grade and Diffuse Intrinsic Pontine Glioma · Scinovex