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W-IQ-TREE: a fast online phylogenetic tool for maximum likelihood analysis

Nucleic Acids Research · 2016 · Vol. 44(W1) · pp. W232–W235
Jana TrifinopoulosLam-Tung NguyenArndt von HaeselerBùi Quang Minh

Abstract

This article presents W-IQ-TREE, an intuitive and user-friendly web interface and server for IQ-TREE, an efficient phylogenetic software for maximum likelihood analysis. W-IQ-TREE supports multiple sequence types (DNA, protein, codon, binary and morphology) in common alignment formats and a wide range of evolutionary models including mixture and partition models. W-IQ-TREE performs fast model selection, partition scheme finding, efficient tree reconstruction, ultrafast bootstrapping, branch tests, and tree topology tests. All computations are conducted on a dedicated computer cluster and the users receive the results via URL or email. W-IQ-TREE is available at http://iqtree.cibiv.univie.ac.at It is free and open to all users and there is no login requirement.

Genomics and Phylogenetic StudiesGenetic diversity and population structurePlant Diversity and EvolutionPhylogenetic treeTree (set theory)BiologyBootstrapping (finance)Range treeTree rearrangementComputer sciencePartition (number theory)Interval treeBinary tree

MeSH terms

AlgorithmsAmino Acid SequenceAnimalsBase SequenceCodonComputer GraphicsBiological EvolutionHumansPhylogenyUser-Computer InterfaceVertebratesLikelihood FunctionsSequence AlignmentInternet

Funding

  • Austrian Science Fund
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