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Composition of the adult digestive tract bacterial microbiome based on seven mouth surfaces, tonsils, throat and stool samples

Genome biology · 2012 · Vol. 13(6) · pp. R42–R42
Nicola SegataSusan Kinder HaakePeter MannonKatherine P. LemonLevi WaldronDirk GeversCurtis HuttenhowerJacques Izard

Abstract

The microbiomes of ten digestive tract sites separated into four types based on composition. A core set of metabolic pathways was present across these diverse digestive tract habitats. These data provide a critical baseline for future studies investigating local and systemic diseases affecting human health.

Gut microbiota and healthProbiotics and Fermented FoodsOral microbiology and periodontitis researchBiologyThroatMicrobiomeDigestive tractGastrointestinal tractMicrobiologyAnatomyInternal medicineBioinformaticsMedicine

MeSH terms

AdolescentAdultFecesFemaleHumansMaleMouthPharynxPhylogenyRNA, Ribosomal, 16SSalivaPalatine TonsilBacterial Typing TechniquesGenes, rRNAActinobacteria

Funding

  • National Science Foundation
  • National Institutes of Health
  • Army Research Office
Citations
1,067
FWCI
21.34
field-weighted impact
References
104
Percentile
100%
vs. same field & year
Citations per year
References
New Bacterial Species Associated with Chronic Periodontitis
Journal of Dental Research · 2003 · 541 citations
Towards the human intestinal microbiota phylogenetic core
Environmental Microbiology · 2009 · 888 citations
Human gut microbes associated with obesity
Nature · 2006 · 8,677 citations
Measurement of Diversity
Nature · 1949 · 13,763 citations
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