article Open AccessTop 10% cited
CHARMM-GUI Membrane Builder for Mixed Bilayers and Its Application to Yeast Membranes
Biophysical Journal · 2009 · Vol. 97(1) · pp. 50–58
Sunhwan Jo(University of Kansas)Joseph B. Lim(University of Maryland, College Park)Jeffery B. Klauda✉(University of Maryland, College Park)Wonpil Im✉(University of Kansas)
Lipid Membrane Structure and BehaviorProtein Structure and DynamicsSpectroscopy and Quantum Chemical StudiesMembraneDipalmitoylphosphatidylcholineChemistryLipid bilayerPhospholipidCholesterolBilayerBiological membraneAnalytical Chemistry (journal)Chromatography
MeSH terms
AutomationCell MembraneCholesterolComputer SimulationElectronsLipid BilayersModels, BiologicalModels, MolecularPhosphatidylcholinesPhosphatidylethanolaminesPhosphatidylserinesSoftwareYeasts1,2-Dipalmitoylphosphatidylcholine
Citations
1,742
FWCI
7.13
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References
57
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98%
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