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The rumen microbial metagenome associated with high methane production in cattle

BMC Genomics · 2015 · Vol. 16(1) · pp. 839–839
R. J. WallaceJohn A. RookeNest McKainCarol-Anne DuthieJimmy J. HyslopDavid RossA. WaterhouseMick WatsonR. Roehe

Abstract

The abundance of archaeal genes in ruminal digesta correlated strongly with differing methane emissions from individual animals, a finding useful for genetic screening purposes. Lower emissions were accompanied by higher Succinovibrionaceae abundance and changes in acetate and hydrogen production leading to less methanogenesis, as similarly postulated for Australian macropods. Large numbers of predicted protein sequences differed between high- and low-methane-emitting cattle. Ninety-nine percent were unknown, indicating a fertile area for future exploitation.

Ruminant Nutrition and Digestive PhysiologyAnaerobic Digestion and Biogas ProductionGut microbiota and healthMetagenomicsBiologyRumenArchaeaKEGGPyrosequencingProteobacteria16S ribosomal RNAMethaneGene

MeSH terms

AustraliaAnimalsArchaeaBacteriaCattleMethaneRNA, Ribosomal, 16SRumenMetagenomeMetagenomicsMicrobiota

Funding

  • Rural and Environment Science and Analytical Services Division
  • Scottish Government
  • Department for Environment, Food and Rural Affairs, UK Government
  • Sight Research UK
  • Scotland’s Rural College
  • Directorate for Biological Sciences
  • Medical Research Council
  • Biotechnology and Biological Sciences Research Council
  • Natural Environment Research Council
Citations
412
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59.04
field-weighted impact
References
76
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100%
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