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Principal components analysis corrects for stratification in genome-wide association studies

Nature Genetics · 2006 · Vol. 38(8) · pp. 904–909
Alkes L. PriceNick J. PattersonRobert M. PlengeMichael E. WeinblattNancy A. ShadickDavid Reich
Genetic Associations and EpidemiologyGenomic variations and chromosomal abnormalitiesGenetic Syndromes and ImprintingPopulation stratificationSpurious relationshipBiologyPrincipal component analysisAllele frequencyGenetic associationGenome-wide association studyPopulationEvolutionary biologyComputational biology

MeSH terms

AlgorithmsAllelesGenetic MarkersGenotypeHumansPhenotypeGenome, HumanCase-Control StudiesPolymorphism, Single NucleotideGenomicsPrincipal Component AnalysisDatabases, Nucleic Acid

Funding

  • Takeda Oncology
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References
Genomic Control for Association Studies
Biometrics · 1999 · 3,224 citations
Genome-wide association studies for common diseases and complex traits
Nature Reviews Genetics · 2005 · 2,867 citations
Association Mapping in Structured Populations
The American Journal of Human Genetics · 2000 · 2,099 citations
A User's Guide to Principal Components
Technometrics · 1993 · 3,347 citations
Genetic Signatures of Strong Recent Positive Selection at the Lactase Gene
The American Journal of Human Genetics · 2004 · 1,182 citations
Tests for Linear Trends in Proportions and Frequencies
Biometrics · 1955 · 2,073 citations
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