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Quantum Chemistry on Graphical Processing Units. 1. Strategies for Two-Electron Integral Evaluation

Journal of Chemical Theory and Computation · 2008 · Vol. 4(2) · pp. 222–231
Ivan S. UfimtsevTodd J. Martı́nez

Abstract

Modern videogames place increasing demands on the computational and graphical hardware, leading to novel architectures that have great potential in the context of high performance computing and molecular simulation. We demonstrate that Graphical Processing Units (GPUs) can be used very efficiently to calculate two-electron repulsion integrals over Gaussian basis functions [Formula: see text] the first step in most quantum chemistry calculations. A benchmark test performed for the evaluation of approximately 10(6) (ss|ss) integrals over contracted s-orbitals showed that a naïve algorithm implemented on the GPU achieves up to 130-fold speedup over a traditional CPU implementation on an AMD Opteron. Subsequent calculations of the Coulomb operator for a 256-atom DNA strand show that the GPU advantage is maintained for basis sets including higher angular momentum functions.

Advanced Chemical Physics StudiesElectron and X-Ray Spectroscopy TechniquesAtomic and Molecular PhysicsComputer scienceSpeedupAtomic orbitalBenchmark (surveying)Computational scienceGaussianContext (archaeology)Quantum chemicalBasis (linear algebra)Quantum chemistry

Funding

  • Division of Chemistry
Citations
615
FWCI
19.22
field-weighted impact
References
28
Percentile
100%
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Citations per year
References
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Proceedings of the Royal Society of London A Mathematical and Physical Sciences · 1950 · 1,249 citations
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