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Non‐coding RNAs: regulators of disease

The Journal of Pathology · 2009 · Vol. 220(2) · pp. 126–139
Ryan J. TaftKen C. PangTim R. MercerMarcel E. DingerJohn S. Mattick

Abstract

For 50 years the term 'gene' has been synonymous with regions of the genome encoding mRNAs that are translated into protein. However, recent genome-wide studies have shown that the human genome is pervasively transcribed and produces many thousands of regulatory non-protein-coding RNAs (ncRNAs), including microRNAs, small interfering RNAs, PIWI-interacting RNAs and various classes of long ncRNAs. It is now clear that these RNAs fulfil critical roles as transcriptional and post-transcriptional regulators and as guides of chromatin-modifying complexes. Here we review the biology of ncRNAs, focusing on the fundamental mechanisms by which ncRNAs facilitate normal development and physiology and, when dysfunctional, underpin disease. We also discuss evidence that intergenic regions associated with complex diseases express ncRNAs, as well as the potential use of ncRNAs as diagnostic markers and therapeutic targets. Taken together, these observations emphasize the need to move beyond the confines of protein-coding genes and highlight the fact that continued investigation of ncRNA biogenesis and function will be necessary for a comprehensive understanding of human disease.

Cancer-related molecular mechanisms researchMicroRNA in disease regulationCircular RNAs in diseasesComputational biologyDiseasemicroRNABiologyCoding (social sciences)GeneticsMedicineGenePathologyMathematics

MeSH terms

AnimalsDiseaseGene Expression RegulationGenetic MarkersHumansBiomarkers, TumorRNA, UntranslatedRNA InterferenceMicroRNAs

Funding

  • Fulbright Australia
  • Menzies Foundation
  • Royal Australasian College of Physicians
  • Queensland Government
  • Australian Research Council
  • National Health and Medical Research Council
  • National Medical Research Council
Citations
1,052
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References
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Nature Reviews Drug Discovery · 2009 · 3,091 citations
Long noncoding RNAs: functional surprises from the RNA world
Genes & Development · 2009 · 2,363 citations
Transcriptional noise and the fidelity of initiation by RNA polymerase II
Nature Structural & Molecular Biology · 2007 · 640 citations
Small silencing RNAs: an expanding universe
Nature Reviews Genetics · 2009 · 2,334 citations
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