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BioGPS: an extensible and customizable portal for querying and organizing gene annotation resources
Genome biology · 2009 · Vol. 10(11) · pp. R130–R130
Chunlei Wu✉(Genomics Institute of the Novartis Research Foundation)Camilo Madariaga Orozco(Genomics Institute of the Novartis Research Foundation)Jason Boyer(Genomics Institute of the Novartis Research Foundation)Marc Leglise(Genomics Institute of the Novartis Research Foundation)James Goodale(Genomics Institute of the Novartis Research Foundation)Serge Batalov(Genomics Institute of the Novartis Research Foundation)Christopher L Hodge(Genomics Institute of the Novartis Research Foundation)J. Haase(Genomics Institute of the Novartis Research Foundation)Jeff Janes(Genomics Institute of the Novartis Research Foundation)Jon W. Huss(Genomics Institute of the Novartis Research Foundation)Andrew I. Su(Genomics Institute of the Novartis Research Foundation)
Abstract
Online gene annotation resources are indispensable for analysis of genomics data. However, the landscape of these online resources is highly fragmented, and scientists often visit dozens of these sites for each gene in a candidate gene list. Here, we introduce BioGPS http://biogps.gnf.org, a centralized gene portal for aggregating distributed gene annotation resources. Moreover, BioGPS embraces the principle of community intelligence, enabling any user to easily and directly contribute to the BioGPS platform.
Gene expression and cancer classificationGenomics and Phylogenetic StudiesMachine Learning in BioinformaticsBiologyAnnotationHuman geneticsGene AnnotationExtensibilityComputational biologyGenome BiologyWorld Wide WebGeneComputer science
MeSH terms
ComputersDatabase Management SystemsGenesGeneticsHumansModels, BiologicalModels, GeneticSoftwareComputational BiologyInternetGenomicsDatabases, GeneticDatabases, Protein
Funding
- National Institutes of Health
- National Institute of General Medical Sciences
Citations
1,374
FWCI
39.93
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27
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100%
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References
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Genome Research · 2008 · 8,505 citations
KEGG for linking genomes to life and the environment
Nucleic Acids Research · 2007 · 6,968 citations
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