article Open AccessTop 10% cited
BSMAP: whole genome bisulfite sequence MAPping program
BMC Bioinformatics · 2009 · Vol. 10(1) · pp. 232–232
Yuanxin Xi✉(Baylor College of Medicine)Wei Li(Baylor College of Medicine)
Abstract
BSMAP is the first general-purpose bisulfite mapping software. It is able to map high-throughput bisulfite reads at whole genome level with feasible memory and CPU usage. It is freely available under GPL v3 license at http://code.google.com/p/bsmap/.
Epigenetics and DNA MethylationCancer-related gene regulationRNA modifications and cancerBisulfiteBisulfite sequencingComputational biologyDNA methylationGenomeComputer scienceMethylated DNA immunoprecipitationBiologyGeneticsGene
MeSH terms
Base SequenceDNASoftwareSulfitesSequence AlignmentSequence Analysis, DNADNA MethylationGenomics
Funding
- National Institutes of Health
Citations
1,296
FWCI
7.53
field-weighted impact
References
8
Percentile
98%
vs. same field & year
Citations per year
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References
Mapping short DNA sequencing reads and calling variants using mapping quality scores
Genome Research · 2008 · 2,707 citations
SOAP: short oligonucleotide alignment program
Bioinformatics · 2008 · 3,664 citations
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