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STIR: software for tomographic image reconstruction release 2

Physics in Medicine and Biology · 2012 · Vol. 57(4) · pp. 867–883
Kris ThielemansCharalampos TsoumpasS. MustafovicTobias BeiselPablo AguiarΝικόλαος ΔικαίοςM. Jacobson

Abstract

We present a new version of STIR (Software for Tomographic Image Reconstruction), an open source object-oriented library implemented in C++ for 3D positron emission tomography reconstruction. This library has been designed such that it can be used for many algorithms and scanner geometries, while being portable to various computing platforms. This second release enhances its flexibility and modular design and includes additional features such as Compton scatter simulation, an additional iterative reconstruction algorithm and parametric image reconstruction (both indirect and direct). We discuss the new features in this release and present example results. STIR can be downloaded from http://stir.sourceforge.net.

Medical Imaging Techniques and ApplicationsRadiation Detection and Scintillator TechnologiesAtomic and Subatomic Physics ResearchComputer scienceIterative reconstructionModular designTomographic reconstructionSoftwareScannerFlexibility (engineering)Computer visionArtificial intelligenceImage (mathematics)

MeSH terms

AlgorithmsAnimalsComputersImage Processing, Computer-AssistedSoftwareTomographyMice

Funding

  • Memorial Sloan-Kettering Cancer Center
  • European Commission
  • Universitat de Barcelona
  • Medical Research Council
Citations
470
FWCI
31.41
field-weighted impact
References
47
Percentile
100%
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Citations per year
References
Ordered subsets algorithms for transmission tomography
Physics in Medicine and Biology · 1999 · 549 citations
Maximum Likelihood Reconstruction for Emission Tomography
IEEE Transactions on Medical Imaging · 1982 · 4,359 citations
Graphical Evaluation of Blood-to-Brain Transfer Constants from Multiple-Time Uptake Data
Journal of Cerebral Blood Flow & Metabolism · 1983 · 3,589 citations
Accelerated image reconstruction using ordered subsets of projection data
IEEE Transactions on Medical Imaging · 1994 · 3,675 citations
Analytic 3D image reconstruction using all detected events
IEEE Transactions on Nuclear Science · 1989 · 761 citations
New, faster, image-based scatter correction for 3D PET
IEEE Transactions on Nuclear Science · 2000 · 515 citations
Bayesian reconstructions from emission tomography data using a modified EM algorithm
IEEE Transactions on Medical Imaging · 1990 · 1,231 citations
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