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Intensity and coherence of motifs in weighted complex networks

Physical Review E · 2005 · Vol. 71(6) · pp. 065103–065103
Jukka-Pekka OnnelaJari SaramäkiJános KertészKimmo Kaski

Abstract

The local structure of unweighted networks can be characterized by the number of times a subgraph appears in the network. The clustering coefficient, reflecting the local configuration of triangles, can be seen as a special case of this approach. In this paper we generalize this method for weighted networks. We introduce subgraph "intensity" as the geometric mean of its link weights "coherence" as the ratio of the geometric to the corresponding arithmetic mean. Using these measures, motif scores and clustering coefficient can be generalized to weighted networks. To demonstrate these concepts, we apply them to financial and metabolic networks and find that inclusion of weights may considerably modify the conclusions obtained from the study of unweighted characteristics.

Complex Network Analysis TechniquesBioinformatics and Genomic NetworksComputational Drug Discovery MethodsClustering coefficientCluster analysisCoherence (philosophical gambling strategy)MathematicsWeighted arithmetic meanPattern recognition (psychology)Network motifComputer scienceWeighted networkComplex network
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References
Statistical mechanics of complex networks
Reviews of Modern Physics · 2002 · 20,311 citations
The architecture of complex weighted networks
Proceedings of the National Academy of Sciences · 2004 · 4,173 citations
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Intensity and coherence of motifs in weighted complex networks
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