article Open AccessTop 10% cited
The CRISPRdb database and tools to display CRISPRs and to generate dictionaries of spacers and repeats
BMC Bioinformatics · 2007 · Vol. 8(1) · pp. 172–172
Ibtissem Grissa✉(Université Paris-Sud)Gilles Vergnaud(Centre National de la Recherche Scientifique)Christine Pourcel(Centre National de la Recherche Scientifique)
Abstract
It is hoped that availability of a public database, regularly updated and which can be queried on the web will help in further dissecting and understanding CRISPR structure and flanking sequences evolution. Subsequent analyses of the intra-species CRISPR polymorphism will be facilitated by CRISPRFinder and the dictionary creator. CRISPRdb is accessible at http://crispr.u-psud.fr/crispr.
CRISPR and Genetic EngineeringGenomics and Phylogenetic StudiesBacteriophages and microbial interactionsCRISPRPalindromeGenomeBiologyGeneticsComputational biologyRepeated sequenceDNADirect repeatCRISPR interference
MeSH terms
AlgorithmsChromosome MappingDatabase Management SystemsRepetitive Sequences, Nucleic AcidSoftwareUser-Computer InterfaceGenome, BacterialGenome, ArchaealDNA, IntergenicDatabases, Genetic
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1,008
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