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MTML-msBayes: Approximate Bayesian comparative phylogeographic inference from multiple taxa and multiple loci with rate heterogeneity

BMC Bioinformatics · 2011 · Vol. 12(1) · pp. 1–1
Wen HuangNaoki TakebayashiYan QiMichael J. Hickerson

Abstract

To retain flexibility and compatibility with existing bioinformatics tools, MTML-msBayes is a pipeline software package consisting of Perl, C and R programs that are executed via the command line. Source code and binaries are available for download at http://msbayes.sourceforge.net/ under an open source license (GNU Public License).

Genomics and Phylogenetic StudiesGenetic diversity and population structureBayesian Methods and Mixture ModelsCoalescent theoryBiologyApproximate Bayesian computationTaxonDivergence (linguistics)InferenceBayesian probabilityEvolutionary biologyStatisticsGenetics

MeSH terms

AlgorithmsAnimalsBayes TheoremBirdsDemographySoftwareGenetic VariationModels, StatisticalSequence Analysis, DNAEvolution, MolecularGene FlowGenetic LociPhylogeography

Funding

  • National Science Foundation
  • City University of New York
  • National Institutes of Health
  • National Center for Research Resources
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MTML-msBayes: Approximate Bayesian comparative phylogeographic inference from multiple taxa and multiple loci with rate heterogeneity · Scinovex