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Thomas E. Cheatham

University of UtahORCID https://orcid.org/0000-0003-0298-3904

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Publications

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Citations

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Impact (2-yr)

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Top Publications

The Amber biomolecular simulation programs

Journal of Computational Chemistry20059,470 citations

PTRAJ and CPPTRAJ: Software for Processing and Analysis of Molecular Dynamics Trajectory Data

Journal of Chemical Theory and Computation20137,355 citations

Calculating Structures and Free Energies of Complex Molecules: Combining Molecular Mechanics and Continuum Models

Accounts of Chemical Research20004,872 citations

Determination of Alkali and Halide Monovalent Ion Parameters for Use in Explicitly Solvated Biomolecular Simulations

The Journal of Physical Chemistry B20083,583 citations

AMBER, a package of computer programs for applying molecular mechanics, normal mode analysis, molecular dynamics and free energy calculations to simulate the structural and energetic properties of molecules

Computer Physics Communications19953,114 citations

Refinement of the AMBER Force Field for Nucleic Acids: Improving the Description of α/γ Conformers

Biophysical Journal20072,207 citations

Refinement of the Cornell et al. Nucleic Acids Force Field Based on Reference Quantum Chemical Calculations of Glycosidic Torsion Profiles

Journal of Chemical Theory and Computation20111,201 citations

Clustering Molecular Dynamics Trajectories: 1. Characterizing the Performance of Different Clustering Algorithms

Journal of Chemical Theory and Computation2007860 citations

Refinement of the Sugar–Phosphate Backbone Torsion Beta for AMBER Force Fields Improves the Description of Z- and B-DNA

Journal of Chemical Theory and Computation2015567 citations

Thomas E. Cheatham · Scinovex