article Open AccessTop 1% cited
Dictionary learning for integrative, multimodal and scalable single-cell analysis
Nature Biotechnology · 2023 · Vol. 42(2) · pp. 293–304
Yuhan Hao✉(New York Genome Center)Tim Stuart(New York Genome Center)Madeline H. Kowalski(NYU Langone Health)Saket Choudhary(New York Genome Center)Paul Hoffman(New York University)Austin Hartman(New York University)Avi Srivastava(New York Genome Center)Gesmira Molla(New York Genome Center)Shaista Madad(New York Genome Center)Carlos Fernandez‐Granda(Courant Institute of Mathematical Sciences)Rahul Satija(New York Genome Center)
Single-cell and spatial transcriptomicsCancer Genomics and DiagnosticsImmune cells in cancerComputer scienceScalabilityMass cytometryComputational biologyChromatinArtificial intelligenceData miningInformation retrievalBiologyGene
MeSH terms
HumansSoftwareSequence Analysis, RNAGene Expression ProfilingSingle-Cell AnalysisTranscriptome
Funding
- Chan Zuckerberg Initiative
- National Institutes of Health
Citations
4,189
FWCI
652.52
field-weighted impact
References
142
Percentile
100%
vs. same field & year
Citations per year
References
Regulatory T cells and Foxp3
Immunological Reviews · 2011 · 744 citations
Laplacian Eigenmaps for Dimensionality Reduction and Data Representation
Neural Computation · 2003 · 7,600 citations
Fast and accurate short read alignment with Burrows–Wheeler transform
Bioinformatics · 2009 · 61,752 citations
Ultrafast and memory-efficient alignment of short DNA sequences to the human genome
Genome biology · 2009 · 22,766 citations
<tt>BLAT</tt>—The <tt>BLAST</tt>-Like Alignment Tool
Genome Research · 2002 · 8,404 citations
Image Denoising Via Sparse and Redundant Representations Over Learned Dictionaries
IEEE Transactions on Image Processing · 2006 · 5,342 citations
$rm K$-SVD: An Algorithm for Designing Overcomplete Dictionaries for Sparse Representation
IEEE Transactions on Signal Processing · 2006 · 9,439 citations
The Human Cell Atlas
eLife · 2017 · 2,286 citations
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