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BioBERT: a pre-trained biomedical language representation model for biomedical text mining

Bioinformatics · 2019 · Vol. 36(4) · pp. 1234–1240
Jinhyuk LeeWonjin YoonSungdong KimDonghyeon KimSunkyu KimChan Ho SoJaewoo Kang

Abstract

We make the pre-trained weights of BioBERT freely available at https://github.com/naver/biobert-pretrained, and the source code for fine-tuning BioBERT available at https://github.com/dmis-lab/biobert.

Topic ModelingBiomedical Text Mining and OntologiesNatural Language Processing TechniquesBiomedical text miningComputer scienceArtificial intelligenceNatural language processingLanguage modelNamed-entity recognitionRelationship extractionText miningText corpusRepresentation (politics)

MeSH terms

LanguageNatural Language ProcessingSoftwareData Mining

Funding

  • Fundação para a Ciência e a Tecnologia
Citations
6,674
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References
Deep learning
Nature · 2015 · 79,164 citations
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