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Best practice in Ecopath with Ecosim food-web models for ecosystem-based management

Ecological Modelling · 2016 · Vol. 331 · pp. 173–184
Johanna J. HeymansMarta CollJason S. LinkSteven MackinsonJeroen SteenbeekCarl J. WaltersVilly Christensen

Abstract

Ecopath with Ecosim (EwE) models are easier to construct and use compared to most other ecosystem modelling techniques and are therefore more widely used by more scientists and managers. This, however, creates a problem with quality assurance; to address this we provide an overview of best practices for creating Ecopath models. We describe the diagnostics that can be used to check for thermodynamic and ecological principles, and highlight principles that should be used for balancing a model. We then highlight the pitfalls when comparing Ecopath models using Ecological Network Analysis indices. For dynamic simulations in Ecosim we show the state of the art in calibrating the model by fitting it to time series using a formal fitting procedure and statistical goodness of fit. Finally, we show how Monte Carlo simulations can be used to address uncertainty in input parameters, and we discuss the use of models in a management context, specifically using the concept of ‘key runs’ for ecosystem-based management. This novel list of best practices for EwE models will enable ecosystem managers to evaluate the goodness of fit of the given EwE model to the ecosystem management question.

Funding

  • Department for Environment, Food and Rural Affairs, UK Government
  • Sight Research UK
  • European Commission
  • Natural Sciences and Engineering Research Council of Canada
  • Natural Environment Research Council
Citations
506
FWCI
26.05
field-weighted impact
References
85
Percentile
100%
vs. same field & year
Citations per year
References
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Ecological Modelling · 1995 · 509 citations
Ecopath with Ecosim: methods, capabilities and limitations
Ecological Modelling · 2003 · 1,878 citations
Measures of ecosystem structure and function derived from analysis of flows
Journal of Theoretical Biology · 1976 · 878 citations
The Ecological Role of Water-Column Microbes in the Sea
Marine Ecology Progress Series · 1983 · 5,372 citations
A new look at the statistical model identification
IEEE Transactions on Automatic Control · 1974 · 49,965 citations
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