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Skewer: a fast and accurate adapter trimmer for next-generation sequencing paired-end reads

BMC Bioinformatics · 2014 · Vol. 15(1) · pp. 182–182
Hongshan JiangRong LeiShou‐Wei DingShuifang Zhu

Abstract

Skewer achieved as yet unmatched accuracies for adapter trimming with low time bound.

Genomics and Phylogenetic StudiesRNA and protein synthesis mechanismsCancer-related molecular mechanisms researchAdapter (computing)TrimmingComputer scienceDNA sequencingAlgorithmComputational biologyBiologyDNAGeneticsComputer hardware

MeSH terms

AlgorithmsAnimalsDrosophilaHumansSoftwareTime FactorsCaenorhabditis elegansArabidopsisSequence Analysis, RNAHigh-Throughput Nucleotide Sequencing

Funding

  • Chinese Academy of Inspection and Quarantine
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Skewer: a fast and accurate adapter trimmer for next-generation sequencing paired-end reads · Scinovex