article Open AccessTop 1% cited
BLAST+: architecture and applications
BMC Bioinformatics · 2009 · Vol. 10(1) · pp. 421–421
Christiam Camacho✉(National Center for Biotechnology Information)George Coulouris(National Institutes of Health)Vahram Avagyan(National Institutes of Health)Ning Ma(National Institutes of Health)Jason S. Papadopoulos(National Institutes of Health)Kevin Bealer(National Institutes of Health)Thomas Madden(National Center for Biotechnology Information)
Abstract
The new BLAST command-line applications, compared to the current BLAST tools, demonstrate substantial speed improvements for long queries as well as chromosome length database sequences. We have also improved the user interface of the command-line applications.
Genomics and Phylogenetic StudiesAlgorithms and Data CompressionGene expression and cancer classificationComputer scienceInterface (matter)HeuristicsSoftwareDatabaseSet (abstract data type)Task (project management)Sequence (biology)Modular designInformation retrieval
MeSH terms
SoftwareSequence AlignmentComputational BiologyDatabases, Genetic
Funding
- National Institutes of Health
- U.S. National Library of Medicine
Citations
22,452
FWCI
36.17
field-weighted impact
References
15
Percentile
100%
vs. same field & year
Citations per year
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References
Basic local alignment search tool
Journal of Molecular Biology · 1990 · 93,570 citations
<tt>BLAT</tt>—The <tt>BLAST</tt>-Like Alignment Tool
Genome Research · 2002 · 8,404 citations
Gapped BLAST and PSI-BLAST: a new generation of protein database search programs
Nucleic Acids Research · 1997 · 74,154 citations
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