Scinovex
review Open AccessTop 1% cited

A window into third-generation sequencing

Human Molecular Genetics · 2010 · Vol. 19(R2) · pp. R227–R240
E. E. SchadtSteve TurnerA. Kasarskis

Abstract

First- and second-generation sequencing technologies have led the way in revolutionizing the field of genomics and beyond, motivating an astonishing number of scientific advances, including enabling a more complete understanding of whole genome sequences and the information encoded therein, a more complete characterization of the methylome and transcriptome and a better understanding of interactions between proteins and DNA. Nevertheless, there are sequencing applications and aspects of genome biology that are presently beyond the reach of current sequencing technologies, leaving fertile ground for additional innovation in this space. In this review, we describe a new generation of single-molecule sequencing technologies (third-generation sequencing) that is emerging to fill this space, with the potential for dramatically longer read lengths, shorter time to result and lower overall cost.

Genomics and Phylogenetic StudiesRNA modifications and cancerRNA and protein synthesis mechanismsBiologyDNA sequencingComputational biologyGenomicsGenomeHybrid genome assemblyCancer genome sequencingGeneticsWhole genome sequencingDNA

MeSH terms

HumansModels, BiologicalSequence Analysis, DNAHigh-Throughput Nucleotide Sequencing
Citations
932
FWCI
32.05
field-weighted impact
References
93
Percentile
100%
vs. same field & year
Citations per year
Cited by
References
ABySS: A parallel assembler for short read sequence data
Genome Research · 2009 · 3,741 citations
RNA-Seq: a revolutionary tool for transcriptomics
Nature Reviews Genetics · 2008 · 13,223 citations
A new method for sequencing DNA.
Proceedings of the National Academy of Sciences · 1977 · 7,962 citations
The potential and challenges of nanopore sequencing
Nature Biotechnology · 2008 · 2,507 citations
Next-generation DNA sequencing
Nature Biotechnology · 2008 · 4,469 citations
Sequencing technologies — the next generation
Nature Reviews Genetics · 2009 · 7,001 citations
Citation Network

How this paper connects to the literature. Drag to explore, click any node to open that paper.

A window into third-generation sequencing · Scinovex