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CLUMPP: a cluster matching and permutation program for dealing with label switching and multimodality in analysis of population structure

Bioinformatics · 2007 · Vol. 23(14) · pp. 1801–1806
Mattias JakobssonNoah A. Rosenberg

Abstract

CLUMPP is freely available at http://rosenberglab.bioinformatics.med.umich.edu/clumpp.html.

Genetic Mapping and Diversity in Plants and AnimalsGenetic and phenotypic traits in livestockGenetic diversity and population structureReplicateCluster analysisPermutation (music)Matching (statistics)PopulationSet (abstract data type)Cluster (spacecraft)Computer scienceData miningMachine learning

MeSH terms

AlgorithmsAnimalsChickensData Interpretation, StatisticalGenetics, PopulationGenotypeModels, GeneticPopulation DynamicsSoftwareModels, StatisticalCluster AnalysisComputational Biology

Funding

  • Burroughs Wellcome Fund
  • Alfred P. Sloan Foundation
  • University of Michigan
  • National Institutes of Health
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