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MADS-box gene family in rice: genome-wide identification, organization and expression profiling during reproductive development and stress

BMC Genomics · 2007 · Vol. 8(1) · pp. 242–242

Rita Arora✉(University of Delhi)Pinky Agarwal(University of Delhi)Swatismita Ray(University of Delhi)A. K. Singh(Indian Agricultural Research Institute)Vijay Pal Singh(Indian Agricultural Research Institute)Akhilesh K. Tyagi(University of Delhi)Sanjay Kapoor(University of Delhi)

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Abstract

Only a limited number of MADS genes have been functionally validated in rice. A comprehensive annotation and transcriptome profiling undertaken in this investigation adds to our understanding of the involvement of MADS-box family genes during reproductive development and stress in rice and also provides the basis for selection of candidate genes for functional validation studies.

Plant Molecular Biology Research Plant Reproductive Biology Plant Gene Expression AnalysisMADS-boxBiologyGeneGeneticsGenomeArabidopsisGene expression profilingGene familyDNA microarraySegmental duplication

MeSH terms

Adaptation, PhysiologicalChromosome MappingMultigene FamilyPhylogenyReproductionOryzaCluster AnalysisConserved SequenceArabidopsisGene Expression Regulation, PlantGene Expression Regulation, DevelopmentalGenome, PlantEvolution, MolecularOligonucleotide Array Sequence AnalysisGene Duplication

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References

The Genomes of Oryza sativa: A History of Duplications